NIGPAS OpenIR
Characterization of the complete mitochondrial genome of Chinese Triops granarius and implications for species delimitation
Sun, Xiaoyan (孙晓燕)1,2; Cheng, Jinhui (程金辉)3,4
2019-08-15
发表期刊INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES
ISSN0141-8130
卷号135页码:734-744
摘要

The mt genome of T. granarius (15.121 bp), containing 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), 2 ribosomal RNA genes (rRNAs) and one control region, present the typical pattern of phyllopod mt genomes from the perspective of gene content and order. All PCGs initiate with standard start codon of ATN and share the complete stop codon of TAA or TAG, whereas nd1 initiates with GTG, nd2 terminates with AGA and nd4 terminates with a single T. The secondary structures of rrnL and rrnS comprise of 48 helices and 32 helices, respectively. The patterns of evolutionary rate heterogeneity were observed at different levels in Triops. Phylogenetic analyses were performed based on the nucleotide sequences and amino acid sequences showed that Asian T. granarius was a sister group to (T. longicaudatus + T. australiensis), and T. cancriformis was the basal Glade of Triops. Furthermore, we investigated the genetic diversity and phylogenetic relationships of different T. granarius s.l. populations. Ten phylogenetic lineages are separated on species level by mean maximum likelihood distance >= 12.2% in the cox1 gene. While the six populations occurring in Inner Mongolia of China, Mongolia and Russia, investigated for haplotypes belonged to the same haplotype networks. (C) 2019 Elsevier B.V. All rights reserved.

关键词Triops granarius Mitochondrial genome Phylogeny
DOI10.1016/j.ijbiomac.2019.05.208
语种英语
关键词[WOS]BRANCHIOPODA NOTOSTRACA ; PHYLOGENETIC-RELATIONSHIPS ; MOLECULAR PHYLOGENY ; CRUSTACEA ; TAXONOMY ; SEQUENCE ; SELECTION ; LINEAGES ; DATABASE ; LUCAS
资助项目National Natural Science Foundation of China[41730317] ; State Key Laboratory of Palaeobiology and Stratigraphy at Nanjing Institute of Geology and Palaeontology, Chinese Academy of Sciences ; UNESCO-IUGS IGCP project[632]
WOS研究方向Biochemistry & Molecular Biology ; Chemistry ; Polymer Science
WOS类目Biochemistry & Molecular Biology ; Chemistry, Applied ; Polymer Science
WOS记录号WOS:000477691600080
项目资助者National Natural Science Foundation of China ; State Key Laboratory of Palaeobiology and Stratigraphy at Nanjing Institute of Geology and Palaeontology, Chinese Academy of Sciences ; UNESCO-IUGS IGCP project
出版者ELSEVIER
文献类型期刊论文
条目标识符http://ir.nigpas.ac.cn/handle/332004/27976
专题中国科学院南京地质古生物研究所
通讯作者Sun, Xiaoyan (孙晓燕)
作者单位1.Chinese Acad Sci, Nanjing Inst Geol & Paleontol, State Key Lab Palaeobiol & Stratig, 39 East Beijing Rd, Nanjing 210008, Jiangsu, Peoples R China
2.Chinese Acad Sci, Ctr Excellence Life & Paleoenvironm, 39 East Beijing Rd, Nanjing 210008, Jiangsu, Peoples R China
3.Chinese Acad Sci, Nanjing Inst Geol & Palaeontol, CAS Key Lab Econ Stratig & Palaeogeog, 39 East Bejing Rd, Nanjing 210008, Jiangsu, Peoples R China
4.Chinese Acad Sci, Ctr Excellence Life & Paleoenvironm, 39 East Bejing Rd, Nanjing 210008, Jiangsu, Peoples R China
推荐引用方式
GB/T 7714
Sun, Xiaoyan ,Cheng, Jinhui . Characterization of the complete mitochondrial genome of Chinese Triops granarius and implications for species delimitation[J]. INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES,2019,135:734-744.
APA Sun, Xiaoyan ,&Cheng, Jinhui .(2019).Characterization of the complete mitochondrial genome of Chinese Triops granarius and implications for species delimitation.INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES,135,734-744.
MLA Sun, Xiaoyan ,et al."Characterization of the complete mitochondrial genome of Chinese Triops granarius and implications for species delimitation".INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES 135(2019):734-744.
条目包含的文件
文件名称/大小 文献类型 版本类型 开放类型 使用许可
Characterization of (3598KB)期刊论文出版稿开放获取CC BY-NC-SA请求全文
个性服务
查看访问统计
谷歌学术
谷歌学术中相似的文章
[Sun, Xiaoyan (孙晓燕)]的文章
[Cheng, Jinhui (程金辉)]的文章
百度学术
百度学术中相似的文章
[Sun, Xiaoyan (孙晓燕)]的文章
[Cheng, Jinhui (程金辉)]的文章
必应学术
必应学术中相似的文章
[Sun, Xiaoyan (孙晓燕)]的文章
[Cheng, Jinhui (程金辉)]的文章
相关权益政策
暂无数据
收藏/分享
所有评论 (0)
暂无评论
 

除非特别说明,本系统中所有内容都受版权保护,并保留所有权利。